STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL06739.1PFAM: glucose-inhibited division protein A; KEGG: tte:TTE2589 hypothetical protein. (453 aa)    
Predicted Functional Partners:
ADL05920.1
KEGG: cpy:Cphy_3804 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
  
 
 0.994
ADL04295.1
KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate protein domain protein TPP-binding.
  
 
 0.993
ADL03776.1
KEGG: cbk:CLL_A3389 dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region.
 
 
 0.919
ADL05426.1
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cpy:Cphy_1098 FAD dependent oxidoreductase.
  
 
 0.881
ADL06741.1
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: apv:Apar_0161 hydantoinase/oxoprolinase.
 
    0.853
ADL06742.1
PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: apv:Apar_0160 hypothetical protein.
 
     0.831
ADL05536.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cbl:CLK_2702 electron transfer flavoprotein, alpha subunit/FixB family protein.
  
 
 0.795
ADL04046.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpy:Cphy_1564 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 
 0.784
cutD
Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).
  
 
 0.769
ADL05926.1
KEGG: eel:EUBELI_01405 ferredoxin hydrogenase; PFAM: hydrogenase large subunit domain protein.
  
 
 0.719
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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