Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_00430 | BU064_08950 | GCA_001902315_01323 | GCA_001902315_01146 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.884 |
BU064_00430 | deoA | GCA_001902315_01323 | GCA_001902315_00023 | Unannotated protein. | Unannotated protein. | 0.916 |
BU064_00430 | deoC | GCA_001902315_01323 | GCA_001902315_00022 | Unannotated protein. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.460 |
BU064_00430 | deoD | GCA_001902315_01323 | GCA_001902315_00021 | Unannotated protein. | Unannotated protein. | 0.899 |
BU064_00430 | tdk | GCA_001902315_01323 | GCA_001902315_00041 | Unannotated protein. | Unannotated protein. | 0.898 |
BU064_00430 | udk | GCA_001902315_01323 | GCA_001902315_00475 | Unannotated protein. | Unannotated protein. | 0.899 |
BU064_08950 | BU064_00430 | GCA_001902315_01146 | GCA_001902315_01323 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.884 |
BU064_08950 | cdd | GCA_001902315_01146 | GCA_001902315_00512 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.904 |
BU064_08950 | deoA | GCA_001902315_01146 | GCA_001902315_00023 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.888 |
BU064_08950 | deoD | GCA_001902315_01146 | GCA_001902315_00021 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.939 |
BU064_08950 | tdk | GCA_001902315_01146 | GCA_001902315_00041 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.466 |
BU064_08950 | udk | GCA_001902315_01146 | GCA_001902315_00475 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.913 |
cdd | BU064_08950 | GCA_001902315_00512 | GCA_001902315_01146 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.904 |
cdd | deoA | GCA_001902315_00512 | GCA_001902315_00023 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein. | 0.984 |
cdd | deoB | GCA_001902315_00512 | GCA_001902315_00024 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.438 |
cdd | deoC | GCA_001902315_00512 | GCA_001902315_00022 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.619 |
cdd | deoD | GCA_001902315_00512 | GCA_001902315_00021 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein. | 0.904 |
cdd | tdk | GCA_001902315_00512 | GCA_001902315_00041 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein. | 0.956 |
cdd | udk | GCA_001902315_00512 | GCA_001902315_00475 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein. | 0.954 |
cdd | upp | GCA_001902315_00512 | GCA_001902315_00048 | Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.445 |
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