Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_05600 | BU064_05620 | GCA_001902315_00167 | GCA_001902315_00163 | Unannotated protein. | Unannotated protein. | 0.545 |
BU064_05600 | BU064_05625 | GCA_001902315_00167 | GCA_001902315_00162 | Unannotated protein. | Unannotated protein. | 0.687 |
BU064_05600 | BU064_05630 | GCA_001902315_00167 | GCA_001902315_00161 | Unannotated protein. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.406 |
BU064_05600 | BU064_05635 | GCA_001902315_00167 | GCA_001902315_00160 | Unannotated protein. | Unannotated protein. | 0.427 |
BU064_05600 | ligA | GCA_001902315_00167 | GCA_001902315_00166 | Unannotated protein. | Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.954 |
BU064_05600 | pcrA | GCA_001902315_00167 | GCA_001902315_00165 | Unannotated protein. | Unannotated protein. | 0.950 |
BU064_05600 | pcrB | GCA_001902315_00167 | GCA_001902315_00164 | Unannotated protein. | Unannotated protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.897 |
BU064_05620 | BU064_05600 | GCA_001902315_00163 | GCA_001902315_00167 | Unannotated protein. | Unannotated protein. | 0.545 |
BU064_05620 | BU064_05625 | GCA_001902315_00163 | GCA_001902315_00162 | Unannotated protein. | Unannotated protein. | 0.471 |
BU064_05620 | ligA | GCA_001902315_00163 | GCA_001902315_00166 | Unannotated protein. | Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.559 |
BU064_05620 | pcrA | GCA_001902315_00163 | GCA_001902315_00165 | Unannotated protein. | Unannotated protein. | 0.559 |
BU064_05620 | pcrB | GCA_001902315_00163 | GCA_001902315_00164 | Unannotated protein. | Unannotated protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.559 |
BU064_05625 | BU064_05600 | GCA_001902315_00162 | GCA_001902315_00167 | Unannotated protein. | Unannotated protein. | 0.687 |
BU064_05625 | BU064_05620 | GCA_001902315_00162 | GCA_001902315_00163 | Unannotated protein. | Unannotated protein. | 0.471 |
BU064_05625 | BU064_05630 | GCA_001902315_00162 | GCA_001902315_00161 | Unannotated protein. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.795 |
BU064_05625 | BU064_05635 | GCA_001902315_00162 | GCA_001902315_00160 | Unannotated protein. | Unannotated protein. | 0.422 |
BU064_05625 | BU064_05640 | GCA_001902315_00162 | GCA_001902315_00159 | Unannotated protein. | Unannotated protein. | 0.479 |
BU064_05625 | BU064_05650 | GCA_001902315_00162 | GCA_001902315_00157 | Unannotated protein. | Unannotated protein; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.407 |
BU064_05625 | BU064_05785 | GCA_001902315_00162 | GCA_001902315_00955 | Unannotated protein. | Unannotated protein. | 0.495 |
BU064_05625 | ligA | GCA_001902315_00162 | GCA_001902315_00166 | Unannotated protein. | Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.690 |
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