Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_04910 | sppA | GCA_001902315_01041 | GCA_001902315_00368 | Unannotated protein. | Unannotated protein. | 0.407 |
BU064_07005 | BU064_07015 | GCA_001902315_00371 | GCA_001902315_00369 | Unannotated protein. | Unannotated protein. | 0.778 |
BU064_07005 | BU064_13190 | GCA_001902315_00371 | GCA_001902315_00675 | Unannotated protein. | Unannotated protein. | 0.772 |
BU064_07005 | ackA | GCA_001902315_00371 | GCA_001902315_00372 | Unannotated protein. | Unannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.801 |
BU064_07005 | sppA | GCA_001902315_00371 | GCA_001902315_00368 | Unannotated protein. | Unannotated protein. | 0.710 |
BU064_07005 | tpx | GCA_001902315_00371 | GCA_001902315_00370 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.798 |
BU064_07015 | BU064_07005 | GCA_001902315_00369 | GCA_001902315_00371 | Unannotated protein. | Unannotated protein. | 0.778 |
BU064_07015 | BU064_07025 | GCA_001902315_00369 | GCA_001902315_00367 | Unannotated protein. | Unannotated protein. | 0.756 |
BU064_07015 | BU064_07035 | GCA_001902315_00369 | GCA_001902315_00365 | Unannotated protein. | Unannotated protein. | 0.644 |
BU064_07015 | ackA | GCA_001902315_00369 | GCA_001902315_00372 | Unannotated protein. | Unannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.543 |
BU064_07015 | sppA | GCA_001902315_00369 | GCA_001902315_00368 | Unannotated protein. | Unannotated protein. | 0.968 |
BU064_07015 | thiI | GCA_001902315_00369 | GCA_001902315_00366 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.654 |
BU064_07015 | tpx | GCA_001902315_00369 | GCA_001902315_00370 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.798 |
BU064_07025 | BU064_07015 | GCA_001902315_00367 | GCA_001902315_00369 | Unannotated protein. | Unannotated protein. | 0.756 |
BU064_07025 | BU064_07035 | GCA_001902315_00367 | GCA_001902315_00365 | Unannotated protein. | Unannotated protein. | 0.811 |
BU064_07025 | sppA | GCA_001902315_00367 | GCA_001902315_00368 | Unannotated protein. | Unannotated protein. | 0.754 |
BU064_07025 | thiI | GCA_001902315_00367 | GCA_001902315_00366 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.800 |
BU064_07035 | BU064_07015 | GCA_001902315_00365 | GCA_001902315_00369 | Unannotated protein. | Unannotated protein. | 0.644 |
BU064_07035 | BU064_07025 | GCA_001902315_00365 | GCA_001902315_00367 | Unannotated protein. | Unannotated protein. | 0.811 |
BU064_07035 | sppA | GCA_001902315_00365 | GCA_001902315_00368 | Unannotated protein. | Unannotated protein. | 0.706 |
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