Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_12710 | BU064_14030 | GCA_001902315_00610 | GCA_001902315_00605 | Unannotated protein. | Unannotated protein. | 0.752 |
BU064_12710 | BU064_14035 | GCA_001902315_00610 | GCA_001902315_00606 | Unannotated protein. | Unannotated protein; Required for transformation and DNA binding. | 0.824 |
BU064_12710 | BU064_14040 | GCA_001902315_00610 | GCA_001902315_00607 | Unannotated protein. | Unannotated protein. | 0.834 |
BU064_12710 | BU064_14045 | GCA_001902315_00610 | GCA_001902315_00608 | Unannotated protein. | Unannotated protein. | 0.824 |
BU064_12710 | BU064_14050 | GCA_001902315_00610 | GCA_001902315_00609 | Unannotated protein. | Unannotated protein. | 0.871 |
BU064_12710 | GCA_001902315_00604 | GCA_001902315_00610 | GCA_001902315_00604 | Unannotated protein. | Unannotated protein. | 0.725 |
BU064_12710 | aroK | GCA_001902315_00610 | GCA_001902315_00611 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.868 |
BU064_12710 | gcvPA | GCA_001902315_00610 | GCA_001902315_00613 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.473 |
BU064_12710 | gcvPB | GCA_001902315_00610 | GCA_001902315_00614 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.473 |
BU064_12710 | gcvT | GCA_001902315_00610 | GCA_001902315_00612 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.502 |
BU064_14030 | BU064_12710 | GCA_001902315_00605 | GCA_001902315_00610 | Unannotated protein. | Unannotated protein. | 0.752 |
BU064_14030 | BU064_14035 | GCA_001902315_00605 | GCA_001902315_00606 | Unannotated protein. | Unannotated protein; Required for transformation and DNA binding. | 0.975 |
BU064_14030 | BU064_14040 | GCA_001902315_00605 | GCA_001902315_00607 | Unannotated protein. | Unannotated protein. | 0.982 |
BU064_14030 | BU064_14045 | GCA_001902315_00605 | GCA_001902315_00608 | Unannotated protein. | Unannotated protein. | 0.847 |
BU064_14030 | BU064_14050 | GCA_001902315_00605 | GCA_001902315_00609 | Unannotated protein. | Unannotated protein. | 0.963 |
BU064_14030 | GCA_001902315_00604 | GCA_001902315_00605 | GCA_001902315_00604 | Unannotated protein. | Unannotated protein. | 0.995 |
BU064_14030 | aroK | GCA_001902315_00605 | GCA_001902315_00611 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.847 |
BU064_14030 | gcvPA | GCA_001902315_00605 | GCA_001902315_00613 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.735 |
BU064_14030 | gcvPB | GCA_001902315_00605 | GCA_001902315_00614 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.735 |
BU064_14030 | gcvT | GCA_001902315_00605 | GCA_001902315_00612 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.745 |
page 1 of 6