Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_02380 | BU064_07655 | GCA_001902315_01730 | GCA_001902315_00718 | Unannotated protein. | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.970 |
BU064_02380 | BU064_07880 | GCA_001902315_01730 | GCA_001902315_01083 | Unannotated protein. | Unannotated protein. | 0.935 |
BU064_02380 | BU064_09080 | GCA_001902315_01730 | GCA_001902315_00632 | Unannotated protein. | Unannotated protein. | 0.919 |
BU064_02380 | BU064_09085 | GCA_001902315_01730 | GCA_001902315_00633 | Unannotated protein. | Unannotated protein. | 0.936 |
BU064_02380 | lpdA | GCA_001902315_01730 | GCA_001902315_00631 | Unannotated protein. | Unannotated protein. | 0.614 |
BU064_02380 | lpdA-2 | GCA_001902315_01730 | GCA_001902315_01081 | Unannotated protein. | Unannotated protein. | 0.597 |
BU064_02380 | odhA | GCA_001902315_01730 | GCA_001902315_00717 | Unannotated protein. | Unannotated protein; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). | 0.950 |
BU064_02380 | pdhA | GCA_001902315_01730 | GCA_001902315_01084 | Unannotated protein. | Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.925 |
BU064_02380 | sucC | GCA_001902315_01730 | GCA_001902315_00935 | Unannotated protein. | Unannotated protein. | 0.774 |
BU064_02380 | sucD | GCA_001902315_01730 | GCA_001902315_00934 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.713 |
BU064_07655 | BU064_02380 | GCA_001902315_00718 | GCA_001902315_01730 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.970 |
BU064_07655 | BU064_07880 | GCA_001902315_00718 | GCA_001902315_01083 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.979 |
BU064_07655 | BU064_09080 | GCA_001902315_00718 | GCA_001902315_00632 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.973 |
BU064_07655 | BU064_09085 | GCA_001902315_00718 | GCA_001902315_00633 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.979 |
BU064_07655 | lpdA | GCA_001902315_00718 | GCA_001902315_00631 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.994 |
BU064_07655 | lpdA-2 | GCA_001902315_00718 | GCA_001902315_01081 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.996 |
BU064_07655 | odhA | GCA_001902315_00718 | GCA_001902315_00717 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). | 0.999 |
BU064_07655 | pdhA | GCA_001902315_00718 | GCA_001902315_01084 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.974 |
BU064_07655 | sucC | GCA_001902315_00718 | GCA_001902315_00935 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein. | 0.984 |
BU064_07655 | sucD | GCA_001902315_00718 | GCA_001902315_00934 | Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.964 |
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