BU064_04955 protein (Staphylococcus succinus)

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gene neighborhood

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Score

BU064_04955

Unannotated protein. (182 aa)

Predicted Functional Partners:

rpmF

0.980

rpsC

0.910

rplK

0.878

tmcAL

0.797

rpsF

0.781

rpsP

0.780

rpsB

0.779

infC

0.778

tsf

0.778

rplU

0.771

Your Current Organism:

Staphylococcus succinus

NCBI taxonomy Id: 61015
Other names: ATCC 700337, CCUG 43571, DSM 14617, S. succinus, strain AMG-D1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BU064_04955	infC	GCA_001902315_01050	GCA_001902315_00402	Unannotated protein.	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.778
BU064_04955	rplK	GCA_001902315_01050	GCA_001902315_01579	Unannotated protein.	Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.878
BU064_04955	rplU	GCA_001902315_01050	GCA_001902315_00439	Unannotated protein.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.771
BU064_04955	rpmF	GCA_001902315_01050	GCA_001902315_01049	Unannotated protein.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.980
BU064_04955	rpsB	GCA_001902315_01050	GCA_001902315_00926	Unannotated protein.	Unannotated protein; Belongs to the universal ribosomal protein uS2 family.	0.779
BU064_04955	rpsC	GCA_001902315_01050	GCA_001902315_02597	Unannotated protein.	Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.910
BU064_04955	rpsF	GCA_001902315_01050	GCA_001902315_01738	Unannotated protein.	Unannotated protein; Binds together with S18 to 16S ribosomal RNA.	0.781
BU064_04955	rpsP	GCA_001902315_01050	GCA_001902315_00943	Unannotated protein.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.780
BU064_04955	tmcAL	GCA_001902315_01050	GCA_001902315_01051	Unannotated protein.	Unannotated protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.	0.797
BU064_04955	tsf	GCA_001902315_01050	GCA_001902315_00925	Unannotated protein.	Unannotated protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.778
infC	BU064_04955	GCA_001902315_00402	GCA_001902315_01050	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein.	0.778
infC	rplK	GCA_001902315_00402	GCA_001902315_01579	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.915
infC	rplU	GCA_001902315_00402	GCA_001902315_00439	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.911
infC	rpmF	GCA_001902315_00402	GCA_001902315_01049	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.817
infC	rpsB	GCA_001902315_00402	GCA_001902315_00926	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Belongs to the universal ribosomal protein uS2 family.	0.931
infC	rpsC	GCA_001902315_00402	GCA_001902315_02597	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.959
infC	rpsF	GCA_001902315_00402	GCA_001902315_01738	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Binds together with S18 to 16S ribosomal RNA.	0.956
infC	rpsP	GCA_001902315_00402	GCA_001902315_00943	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.919
infC	tsf	GCA_001902315_00402	GCA_001902315_00925	Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Unannotated protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.876
rplK	BU064_04955	GCA_001902315_01579	GCA_001902315_01050	Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Unannotated protein.	0.878