STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU064_06525Unannotated protein. (80 aa)    
Predicted Functional Partners:
BU064_06520
Unannotated protein.
       0.800
BU064_10850
Unannotated protein.
  
 
 0.753
BU064_06235
Unannotated protein; Belongs to the HesB/IscA family.
  
 
 0.736
BU064_00985
Unannotated protein.
 
 
 0.728
BU064_07035
Unannotated protein.
 
 
 0.720
BU064_06615
Unannotated protein.
  
 
 0.695
BU064_06440
Unannotated protein.
 
 
 0.694
ilvD
Unannotated protein; Belongs to the IlvD/Edd family.
   
 
 0.506
ilvD-2
Unannotated protein; Belongs to the IlvD/Edd family.
   
 
 0.506
BU064_02185
Unannotated protein.
     
 0.468
Your Current Organism:
Staphylococcus succinus
NCBI taxonomy Id: 61015
Other names: ATCC 700337, CCUG 43571, DSM 14617, S. succinus, strain AMG-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.