Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_00345 | BU064_00350 | GCA_001902315_01306 | GCA_001902315_01307 | Unannotated protein. | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.791 |
BU064_00345 | BU064_00355 | GCA_001902315_01306 | GCA_001902315_01308 | Unannotated protein. | Unannotated protein. | 0.729 |
BU064_00345 | rnr | GCA_001902315_01306 | GCA_001902315_01305 | Unannotated protein. | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.895 |
BU064_00345 | smpB | GCA_001902315_01306 | GCA_001902315_01304 | Unannotated protein. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.819 |
BU064_00350 | BU064_00345 | GCA_001902315_01307 | GCA_001902315_01306 | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Unannotated protein. | 0.791 |
BU064_00350 | BU064_00355 | GCA_001902315_01307 | GCA_001902315_01308 | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Unannotated protein. | 0.647 |
BU064_00350 | eno | GCA_001902315_01307 | GCA_001902315_01309 | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.582 |
BU064_00350 | rnr | GCA_001902315_01307 | GCA_001902315_01305 | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.794 |
BU064_00350 | smpB | GCA_001902315_01307 | GCA_001902315_01304 | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.796 |
BU064_00355 | BU064_00345 | GCA_001902315_01308 | GCA_001902315_01306 | Unannotated protein. | Unannotated protein. | 0.729 |
BU064_00355 | BU064_00350 | GCA_001902315_01308 | GCA_001902315_01307 | Unannotated protein. | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.647 |
BU064_00355 | eno | GCA_001902315_01308 | GCA_001902315_01309 | Unannotated protein. | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.582 |
BU064_00355 | rnr | GCA_001902315_01308 | GCA_001902315_01305 | Unannotated protein. | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.709 |
BU064_00355 | smpB | GCA_001902315_01308 | GCA_001902315_01304 | Unannotated protein. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.701 |
eno | BU064_00350 | GCA_001902315_01309 | GCA_001902315_01307 | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.582 |
eno | BU064_00355 | GCA_001902315_01309 | GCA_001902315_01308 | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Unannotated protein. | 0.582 |
eno | rnr | GCA_001902315_01309 | GCA_001902315_01305 | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.407 |
rnr | BU064_00345 | GCA_001902315_01305 | GCA_001902315_01306 | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Unannotated protein. | 0.895 |
rnr | BU064_00350 | GCA_001902315_01305 | GCA_001902315_01307 | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.794 |
rnr | BU064_00355 | GCA_001902315_01305 | GCA_001902315_01308 | Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Unannotated protein. | 0.709 |
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