STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytxJUnannotated protein. (106 aa)    
Predicted Functional Partners:
ypdA
Unannotated protein.
 
 0.810
BU064_00560
Unannotated protein; Belongs to the glycerate kinase type-1 family.
     
 0.799
bshC
Unannotated protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
  
 0.791
BU064_11450
Unannotated protein; Belongs to the UPF0403 family.
  
   
 0.735
trxB
Unannotated protein.
  
 0.682
BU064_08150
Unannotated protein.
  
 0.682
BU064_06570
Unannotated protein.
  
     0.680
bshA
Unannotated protein.
  
   
 0.671
BU064_04610
Unannotated protein; Belongs to the UPF0403 family.
  
   
 0.661
BU064_08225
Unannotated protein.
    
 
 0.653
Your Current Organism:
Staphylococcus succinus
NCBI taxonomy Id: 61015
Other names: ATCC 700337, CCUG 43571, DSM 14617, S. succinus, strain AMG-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.