Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_01050 | BU064_01055 | GCA_001902315_01594 | GCA_001902315_01593 | Unannotated protein; Belongs to the CtsR family. | Unannotated protein. | 0.980 |
BU064_01050 | BU064_01065 | GCA_001902315_01594 | GCA_001902315_01591 | Unannotated protein; Belongs to the CtsR family. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.969 |
BU064_01050 | mcsB | GCA_001902315_01594 | GCA_001902315_01592 | Unannotated protein; Belongs to the CtsR family. | Unannotated protein; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family. | 0.984 |
BU064_01055 | BU064_01050 | GCA_001902315_01593 | GCA_001902315_01594 | Unannotated protein. | Unannotated protein; Belongs to the CtsR family. | 0.980 |
BU064_01055 | BU064_01065 | GCA_001902315_01593 | GCA_001902315_01591 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.944 |
BU064_01055 | mcsB | GCA_001902315_01593 | GCA_001902315_01592 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family. | 0.996 |
BU064_01065 | BU064_01050 | GCA_001902315_01591 | GCA_001902315_01594 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Belongs to the CtsR family. | 0.969 |
BU064_01065 | BU064_01055 | GCA_001902315_01591 | GCA_001902315_01593 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein. | 0.944 |
BU064_01065 | BU064_06430 | GCA_001902315_01591 | GCA_001902315_00466 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein. | 0.783 |
BU064_01065 | clpP | GCA_001902315_01591 | GCA_001902315_01320 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.979 |
BU064_01065 | clpX | GCA_001902315_01591 | GCA_001902315_00408 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.824 |
BU064_01065 | dnaJ | GCA_001902315_01591 | GCA_001902315_00502 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.967 |
BU064_01065 | dnaK | GCA_001902315_01591 | GCA_001902315_00501 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.953 |
BU064_01065 | grpE | GCA_001902315_01591 | GCA_001902315_00500 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.840 |
BU064_01065 | mcsB | GCA_001902315_01591 | GCA_001902315_01592 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family. | 0.977 |
BU064_01065 | mecA | GCA_001902315_01591 | GCA_001902315_01172 | Unannotated protein; Belongs to the ClpA/ClpB family. | Unannotated protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.995 |
BU064_06430 | BU064_01065 | GCA_001902315_00466 | GCA_001902315_01591 | Unannotated protein. | Unannotated protein; Belongs to the ClpA/ClpB family. | 0.783 |
BU064_06430 | clpP | GCA_001902315_00466 | GCA_001902315_01320 | Unannotated protein. | Unannotated protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.579 |
BU064_06430 | dnaJ | GCA_001902315_00466 | GCA_001902315_00502 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.894 |
BU064_06430 | dnaK | GCA_001902315_00466 | GCA_001902315_00501 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.929 |
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