STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU064_05085Unannotated protein. (586 aa)    
Predicted Functional Partners:
BU064_05080
Unannotated protein.
     0.996
BU064_05075
Unannotated protein.
 
   0.974
sucC
Unannotated protein.
  
 0.973
arcC
Unannotated protein; Belongs to the carbamate kinase family.
 
     0.939
odhA
Unannotated protein; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
  
 0.914
allD
Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family.
 
    0.912
BU064_01475
Unannotated protein; Belongs to the citrate synthase family.
  
 0.862
BU064_08225
Unannotated protein.
   
 
 0.843
BU064_05100
Unannotated protein.
 
     0.837
fumC
Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.830
Your Current Organism:
Staphylococcus succinus
NCBI taxonomy Id: 61015
Other names: ATCC 700337, CCUG 43571, DSM 14617, S. succinus, strain AMG-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.