Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU064_04045 | BU064_04055 | GCA_001902315_02218 | GCA_001902315_02217 | Unannotated protein. | Unannotated protein. | 0.580 |
BU064_04045 | adcA | GCA_001902315_02218 | GCA_001902315_02432 | Unannotated protein. | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | 0.835 |
BU064_04045 | folE2 | GCA_001902315_02218 | GCA_001902315_01525 | Unannotated protein. | Unannotated protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.469 |
BU064_04045 | hisI | GCA_001902315_02218 | GCA_001902315_02373 | Unannotated protein. | Unannotated protein; In the N-terminal section; belongs to the PRA-CH family. | 0.413 |
BU064_04045 | map | GCA_001902315_02218 | GCA_001902315_00182 | Unannotated protein. | Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.691 |
BU064_04045 | rpmB | GCA_001902315_02218 | GCA_001902315_00962 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.423 |
BU064_04045 | rpsN | GCA_001902315_02218 | GCA_001902315_00845 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.451 |
BU064_04045 | rpsZ | GCA_001902315_02218 | GCA_001902315_02604 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.451 |
BU064_04055 | BU064_04045 | GCA_001902315_02217 | GCA_001902315_02218 | Unannotated protein. | Unannotated protein. | 0.580 |
BU064_04055 | adcA | GCA_001902315_02217 | GCA_001902315_02432 | Unannotated protein. | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | 0.835 |
BU064_04055 | folE2 | GCA_001902315_02217 | GCA_001902315_01525 | Unannotated protein. | Unannotated protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.469 |
BU064_04055 | hisI | GCA_001902315_02217 | GCA_001902315_02373 | Unannotated protein. | Unannotated protein; In the N-terminal section; belongs to the PRA-CH family. | 0.413 |
BU064_04055 | map | GCA_001902315_02217 | GCA_001902315_00182 | Unannotated protein. | Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.694 |
BU064_04055 | rpmB | GCA_001902315_02217 | GCA_001902315_00962 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.423 |
BU064_04055 | rpsN | GCA_001902315_02217 | GCA_001902315_00845 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.559 |
BU064_04055 | rpsZ | GCA_001902315_02217 | GCA_001902315_02604 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.454 |
adcA | BU064_04045 | GCA_001902315_02432 | GCA_001902315_02218 | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | Unannotated protein. | 0.835 |
adcA | BU064_04055 | GCA_001902315_02432 | GCA_001902315_02217 | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | Unannotated protein. | 0.835 |
adcA | folE2 | GCA_001902315_02432 | GCA_001902315_01525 | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | Unannotated protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.548 |
adcA | rpmB | GCA_001902315_02432 | GCA_001902315_00962 | Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.419 |
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