STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAI_15792Uncharacterized protein C20orf116. (285 aa)    
Predicted Functional Partners:
EAI_03707
CDK5 regulatory subunit-associated protein 3.
    
 
 0.961
EAI_06491
UPF0555 protein KIAA0776-like protein.
    
 
 0.955
EAI_13911
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
    
 
 0.740
EAI_09558
Probable Ufm1-specific protease 2.
    
 
 0.620
EAI_04735
Ubiquitin-like modifier-activating enzyme 5.
      
 0.542
EAI_12959
Ufm1-specific protease 1.
    
 
 0.453
EAI_04055
Aspartyl-tRNA synthetase, mitochondrial.
      
 0.434
EAI_09874
Signal recognition particle receptor subunit beta.
    
 
 0.413
EAI_06033
Signal recognition particle receptor subunit alpha-like protein.
    
 
 0.409
Your Current Organism:
Harpegnathos saltator
NCBI taxonomy Id: 610380
Other names: H. saltator
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