STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAI_12759Rootletin. (1926 aa)    
Predicted Functional Partners:
EAI_07915
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.658
EAI_14011
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.642
EAI_10304
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.642
EAI_08418
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.641
EAI_05414
DNA-directed RNA polymerase II subunit RPB3.
    
 0.641
EAI_05887
DNA-directed RNA polymerase II subunit RPB11.
    
 0.638
EAI_09494
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.632
EAI_17216
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.630
EAI_02329
Transcription initiation factor IIB.
    
 0.623
EAI_01526
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.621
Your Current Organism:
Harpegnathos saltator
NCBI taxonomy Id: 610380
Other names: H. saltator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.