STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAI_08079Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (724 aa)    
Predicted Functional Partners:
EAI_05219
Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
  
  
 
0.902
EAI_09297
ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family.
  
  
 
0.901
EAI_14179
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.744
EAI_17504
Guanine nucleotide-binding protein-like 3-like protein.
   
 0.702
EAI_09283
Probable rRNA-processing protein EBP2-like protein.
   
 0.676
EAI_15573
H/ACA ribonucleoprotein complex subunit 4.
  
 
 0.673
EAI_11630
Nucleolar protein 5.
  
 
 0.645
EAI_04442
Superkiller viralicidic activity 2-like 2.
   
 0.637
EAI_16778
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.635
EAI_07455
Calcium homeostasis endoplasmic reticulum protein.
   
 0.633
Your Current Organism:
Harpegnathos saltator
NCBI taxonomy Id: 610380
Other names: H. saltator
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.