STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAI_12209Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (768 aa)    
Predicted Functional Partners:
EAI_03633
Protein transport protein Sec31A.
   
 0.999
EAI_01631
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
   
 0.999
EAI_01682
Protein transport protein Sec24C.
   
 0.999
EAI_06885
Protein transport protein Sec24B.
   
0.998
EAI_04387
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.993
EAI_05799
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.992
EAI_10448
Protein transport protein Sec16A.
   
 0.987
EAI_06884
Uncharacterized protein.
   
 0.983
EAI_14185
Ankyrin repeat domain-containing protein 40.
   
 0.980
EAI_10447
Uncharacterized protein.
   
 0.960
Your Current Organism:
Harpegnathos saltator
NCBI taxonomy Id: 610380
Other names: H. saltator
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