STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVKKP00000000193annotation not available (136 aa)    
Predicted Functional Partners:
ENSVKKP00000020491
annotation not available
   
 0.969
KDM6B
Lysine demethylase 6B.
   
 0.969
ENSVKKP00000000233
annotation not available
 
 
 0.929
ARID4A
AT-rich interaction domain 4A.
   
 0.915
ARID4B
AT-rich interaction domain 4B.
   
 0.915
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.914
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.889
HAT1
Histone acetyltransferase 1.
    
 0.888
ENSVKKP00000001680
annotation not available
   
 0.886
CDYL2
Chromodomain Y like 2.
   
 0.886
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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