STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (414 aa)    
Predicted Functional Partners:
BRD2
Bromodomain containing 2.
    
 
 0.696
BRD4
Bromodomain containing 4.
    
 
 0.696
BRDT
Bromodomain testis associated.
    
 
 0.696
BRD3
Bromodomain containing 3.
    
 
 0.696
ENSVKKP00000027116
annotation not available
    
 
 0.696
ENSVKKP00000021742
annotation not available
    
 0.678
H4C8
H4 clustered histone 8.
    
 0.678
ENSVKKP00000028929
annotation not available
    
 0.678
KIAA2026
KIAA2026.
    
 
 0.676
ENSVKKP00000000201
annotation not available
    
 0.651
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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