STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVKKP00000001945annotation not available (860 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
   0.634
NME8
NME/NM23 family member 8.
    
  0.490
TRIO
Trio Rho guanine nucleotide exchange factor.
    
  0.457
ENSVKKP00000021157
annotation not available
    
  0.457
ENSVKKP00000007010
annotation not available
    
  0.414
ENSVKKP00000007013
annotation not available
    
  0.414
RIPK4
Receptor interacting serine/threonine kinase 4.
    
  0.414
EFHB
EF-hand domain family member B.
    
   0.400
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.