STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGCR3-hydroxy-3-methylglutaryl-CoA reductase. (882 aa)    
Predicted Functional Partners:
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
 
 0.995
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
  
 
 0.994
UBIAD1
UbiA prenyltransferase domain containing 1.
   
 
 0.953
MVD
Mevalonate diphosphate decarboxylase.
  
 
 0.938
SQLE
Squalene epoxidase.
   
  
 0.929
ENSVKKP00000027455
annotation not available
  
 0.922
ENSVKKP00000027457
annotation not available
  
 0.922
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
  
  
 0.919
INSIG1
Insulin induced gene 1.
   
 
 0.882
INSIG2
Insulin induced gene 2.
   
 
 0.882
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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