STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTFR1Mitochondrial fission regulator 1. (312 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.631
TEX10
Testis expressed 10.
    
 0.614
ENSVKKP00000002489
annotation not available
   
  0.608
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.598
RHBDL3
Rhomboid like 3.
    
  0.592
ENSVKKP00000018505
annotation not available
    
 0.539
ENSVKKP00000002177
annotation not available
   
  0.535
ENSVKKP00000002359
annotation not available
   
  0.535
NOL9
Nucleolar protein 9.
    
  0.522
RPL8
Ribosomal protein L8.
    
  0.521
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.