STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPA1Inorganic pyrophosphatase 1. (289 aa)    
Predicted Functional Partners:
LHPP
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
     
 0.931
BPTF
Bromodomain PHD finger transcription factor.
    
 0.924
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.920
ENSVKKP00000024254
annotation not available
  
 
 0.920
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.917
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.912
ATP5F1C
ATP synthase F1 subunit gamma.
  
 
 0.905
ATP6V0B
ATPase H+ transporting V0 subunit b.
  
 
 0.885
ENSVKKP00000004107
annotation not available
  
 
 0.875
ATP6V0C
ATPase H+ transporting V0 subunit c.
  
 
 0.868
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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