STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPIARibose 5-phosphate isomerase A. (282 aa)    
Predicted Functional Partners:
ENSVKKP00000028646
annotation not available
  
 0.980
TKT
Transketolase.
   
 0.966
TKTL2
Transketolase like 2.
   
 0.966
PGD
Phosphogluconate dehydrogenase.
   
 
 0.963
PGM1
Phosphoglucomutase 1.
  
 
 0.953
TALDO1
Transaldolase 1.
  
 0.951
RBKS
Ribokinase.
    
 0.949
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
  
 
 0.945
PGM2
Phosphoglucomutase 2.
    
 0.939
XYLB
Xylulokinase.
    
 0.922
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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