ENSVKKP00000006777 protein (Varanus komodoensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSVKKP00000006777

annotation not available (301 aa)

Predicted Functional Partners:

ENSVKKP00000018104

0.747

NDUFAB1

0.747

CYP7A1

0.746

MGLL

0.737

ENSVKKP00000012981

0.736

ACSL4

0.733

ACSL3

0.733

LIPC

0.730

ENSVKKP00000020707

0.725

ENSVKKP00000024872

0.719

Your Current Organism:

Varanus komodoensis

NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACSL3	ACSL4	ENSVKKP00000016835	ENSVKKP00000014644	acyl-CoA synthetase long chain family member 3.	acyl-CoA synthetase long chain family member 4.	0.846
ACSL3	ENSVKKP00000006777	ENSVKKP00000016835	ENSVKKP00000006777	acyl-CoA synthetase long chain family member 3.	annotation not available	0.733
ACSL3	ENSVKKP00000012981	ENSVKKP00000016835	ENSVKKP00000012981	acyl-CoA synthetase long chain family member 3.	annotation not available	0.767
ACSL3	ENSVKKP00000018104	ENSVKKP00000016835	ENSVKKP00000018104	acyl-CoA synthetase long chain family member 3.	annotation not available	0.521
ACSL3	ENSVKKP00000020707	ENSVKKP00000016835	ENSVKKP00000020707	acyl-CoA synthetase long chain family member 3.	annotation not available	0.849
ACSL3	LIPC	ENSVKKP00000016835	ENSVKKP00000026652	acyl-CoA synthetase long chain family member 3.	Lipase C, hepatic type.	0.818
ACSL3	MGLL	ENSVKKP00000016835	ENSVKKP00000001514	acyl-CoA synthetase long chain family member 3.	Monoglyceride lipase.	0.908
ACSL3	NDUFAB1	ENSVKKP00000016835	ENSVKKP00000018116	acyl-CoA synthetase long chain family member 3.	NADH:ubiquinone oxidoreductase subunit AB1.	0.521
ACSL4	ACSL3	ENSVKKP00000014644	ENSVKKP00000016835	acyl-CoA synthetase long chain family member 4.	acyl-CoA synthetase long chain family member 3.	0.846
ACSL4	ENSVKKP00000006777	ENSVKKP00000014644	ENSVKKP00000006777	acyl-CoA synthetase long chain family member 4.	annotation not available	0.733
ACSL4	ENSVKKP00000012981	ENSVKKP00000014644	ENSVKKP00000012981	acyl-CoA synthetase long chain family member 4.	annotation not available	0.767
ACSL4	ENSVKKP00000018104	ENSVKKP00000014644	ENSVKKP00000018104	acyl-CoA synthetase long chain family member 4.	annotation not available	0.521
ACSL4	ENSVKKP00000020707	ENSVKKP00000014644	ENSVKKP00000020707	acyl-CoA synthetase long chain family member 4.	annotation not available	0.839
ACSL4	LIPC	ENSVKKP00000014644	ENSVKKP00000026652	acyl-CoA synthetase long chain family member 4.	Lipase C, hepatic type.	0.804
ACSL4	MGLL	ENSVKKP00000014644	ENSVKKP00000001514	acyl-CoA synthetase long chain family member 4.	Monoglyceride lipase.	0.817
ACSL4	NDUFAB1	ENSVKKP00000014644	ENSVKKP00000018116	acyl-CoA synthetase long chain family member 4.	NADH:ubiquinone oxidoreductase subunit AB1.	0.521
CYP7A1	ENSVKKP00000006777	ENSVKKP00000000449	ENSVKKP00000006777	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.746
CYP7A1	ENSVKKP00000018104	ENSVKKP00000000449	ENSVKKP00000018104	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.661
CYP7A1	ENSVKKP00000024872	ENSVKKP00000000449	ENSVKKP00000024872	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.906
CYP7A1	NDUFAB1	ENSVKKP00000000449	ENSVKKP00000018116	Cytochrome P450 family 7 subfamily A member 1.	NADH:ubiquinone oxidoreductase subunit AB1.	0.661