STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM1Leucine zipper and EF-hand containing transmembrane protein 1. (770 aa)    
Predicted Functional Partners:
RPS2
Ribosomal protein S2.
    
 
 0.672
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.665
RPS7
Ribosomal protein S7.
    
 
 0.661
RPL8
Ribosomal protein L8.
    
 
 0.659
TOMM22
Translocase of outer mitochondrial membrane 22.
   
 
 0.657
RPS18
Ribosomal protein S18.
    
   0.655
RPL11
Ribosomal protein L11.
    
   0.655
RPS9
Ribosomal protein S9.
    
   0.655
RPL23
Ribosomal protein L23.
    
   0.655
RPS11
Ribosomal protein S11.
    
   0.655
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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