STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VARS1valyl-tRNA synthetase 1. (1265 aa)    
Predicted Functional Partners:
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
0.999
MARS1
methionyl-tRNA synthetase 1.
  
 0.999
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 0.999
KARS1
lysyl-tRNA synthetase 1.
  
 0.988
LARS1
leucyl-tRNA synthetase 1.
   
 0.987
IARS1
isoleucyl-tRNA synthetase 1.
  
0.986
EEF1B2
Eukaryotic translation elongation factor 1 beta 2.
   
 0.984
ENSVKKP00000026059
annotation not available
   
 0.984
ENSVKKP00000026063
annotation not available
   
 0.984
YARS1
tyrosyl-tRNA synthetase 1.
  
 0.983
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.