STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL38Ribosomal protein L38. (95 aa)    
Predicted Functional Partners:
RPS7
Ribosomal protein S7.
   
 
 0.999
RPL23A
Ribosomal protein L23a.
   
 0.999
RPS20
Ribosomal protein S20.
   
 
 0.999
RPL15
Ribosomal protein L15.
   
 
 0.999
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
RPL35
Ribosomal protein L35.
   
 0.999
RPS18
Ribosomal protein S18.
   
 
 0.999
RPSA
Ribosomal protein SA.
   
 
 0.999
RPL14
Ribosomal protein L14.
   
 0.999
RPS21
Ribosomal protein S21.
   
 0.999
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.