STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRProstaglandin F receptor. (364 aa)    
Predicted Functional Partners:
GNA15
G protein subunit alpha 15.
    
  0.901
GNA12
G protein subunit alpha 12.
    
  0.844
GNA13
G protein subunit alpha 13.
    
  0.844
ENSVKKP00000014959
annotation not available
    
  0.844
GNAS
GNAS complex locus.
   
  0.831
GNAL
G protein subunit alpha L.
   
  0.831
ENSVKKP00000028356
annotation not available
    
 0.829
CXCL8
C-X-C motif chemokine ligand 8.
    
 0.815
ENSVKKP00000017688
annotation not available
    
  0.804
AGT
Angiotensinogen.
    
  0.804
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.