Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4A | ARID4B | ENSVKKP00000001481 | ENSVKKP00000026574 | AT-rich interaction domain 4A. | AT-rich interaction domain 4B. | 0.740 |
ARID4A | MYSM1 | ENSVKKP00000001481 | ENSVKKP00000017624 | AT-rich interaction domain 4A. | Myb like, SWIRM and MPN domains 1. | 0.936 |
ARID4A | TMC7 | ENSVKKP00000001481 | ENSVKKP00000010030 | AT-rich interaction domain 4A. | Transmembrane channel like 7. | 0.714 |
ARID4A | WDR90 | ENSVKKP00000001481 | ENSVKKP00000010896 | AT-rich interaction domain 4A. | WD repeat domain 90. | 0.416 |
ARID4B | ARID4A | ENSVKKP00000026574 | ENSVKKP00000001481 | AT-rich interaction domain 4B. | AT-rich interaction domain 4A. | 0.740 |
ARID4B | MYSM1 | ENSVKKP00000026574 | ENSVKKP00000017624 | AT-rich interaction domain 4B. | Myb like, SWIRM and MPN domains 1. | 0.938 |
ARID4B | TMC7 | ENSVKKP00000026574 | ENSVKKP00000010030 | AT-rich interaction domain 4B. | Transmembrane channel like 7. | 0.714 |
ARID4B | WDR90 | ENSVKKP00000026574 | ENSVKKP00000010896 | AT-rich interaction domain 4B. | WD repeat domain 90. | 0.416 |
ENSVKKP00000001877 | MYSM1 | ENSVKKP00000001877 | ENSVKKP00000017624 | annotation not available | Myb like, SWIRM and MPN domains 1. | 0.600 |
ENSVKKP00000001877 | RIPK4 | ENSVKKP00000001877 | ENSVKKP00000021939 | annotation not available | Receptor interacting serine/threonine kinase 4. | 0.695 |
ENSVKKP00000001877 | TMC7 | ENSVKKP00000001877 | ENSVKKP00000010030 | annotation not available | Transmembrane channel like 7. | 0.575 |
LEO1 | RIPK4 | ENSVKKP00000004324 | ENSVKKP00000021939 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Receptor interacting serine/threonine kinase 4. | 0.750 |
LEO1 | SLF1 | ENSVKKP00000004324 | ENSVKKP00000010573 | LEO1 homolog, Paf1/RNA polymerase II complex component. | SMC5-SMC6 complex localization factor 1. | 0.720 |
LEO1 | TMC7 | ENSVKKP00000004324 | ENSVKKP00000010030 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Transmembrane channel like 7. | 0.666 |
LEO1 | WDR90 | ENSVKKP00000004324 | ENSVKKP00000010896 | LEO1 homolog, Paf1/RNA polymerase II complex component. | WD repeat domain 90. | 0.814 |
MET | PTK7 | ENSVKKP00000018624 | ENSVKKP00000018486 | MET proto-oncogene, receptor tyrosine kinase. | Protein tyrosine kinase 7 (inactive). | 0.903 |
MET | RIPK4 | ENSVKKP00000018624 | ENSVKKP00000021939 | MET proto-oncogene, receptor tyrosine kinase. | Receptor interacting serine/threonine kinase 4. | 0.624 |
MET | TMC7 | ENSVKKP00000018624 | ENSVKKP00000010030 | MET proto-oncogene, receptor tyrosine kinase. | Transmembrane channel like 7. | 0.568 |
MET | WDR90 | ENSVKKP00000018624 | ENSVKKP00000010896 | MET proto-oncogene, receptor tyrosine kinase. | WD repeat domain 90. | 0.536 |
MYSM1 | ARID4A | ENSVKKP00000017624 | ENSVKKP00000001481 | Myb like, SWIRM and MPN domains 1. | AT-rich interaction domain 4A. | 0.936 |
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