STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APLP1Amyloid beta precursor like protein 1. (603 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 0.840
NAE1
NEDD8 activating enzyme E1 subunit 1.
    
 0.832
CNTN5
Contactin 5.
   
 
 0.793
ENSVKKP00000011123
annotation not available
    
 0.762
ENSVKKP00000011124
annotation not available
    
 0.762
ENSVKKP00000011125
annotation not available
    
 0.762
ENSVKKP00000025585
annotation not available
    
 0.762
ENSVKKP00000025586
annotation not available
    
 0.762
NCSTN
Nicastrin.
    
 0.751
APBA1
Amyloid beta precursor protein binding family A member 1.
   
 
 0.750
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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