STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF3ARFGEF family member 3. (2173 aa)    
Predicted Functional Partners:
PHB2
Prohibitin 2.
    
 
 0.830
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.591
CNOT9
CCR4-NOT transcription complex subunit 9.
      
 0.590
GPBP1
GC-rich promoter binding protein 1.
      
 0.590
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.590
DEDD
Death effector domain containing.
      
 0.589
ENSVKKP00000021940
annotation not available
      
 0.533
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.532
EAPP
E2F associated phosphoprotein.
      
 0.528
CHMP7
Charged multivesicular body protein 7.
      
 0.527
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.