STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVKKP00000014136annotation not available (424 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.969
RPL23A
Ribosomal protein L23a.
  
 0.853
RPL35
Ribosomal protein L35.
  
 0.850
RPL31
Ribosomal protein L31.
   
 0.850
RPL30
Ribosomal protein L30.
   
 0.849
RPL29
Ribosomal protein L29.
   
 0.849
RPL35A
Ribosomal protein L35a.
   
 0.848
ENSVKKP00000005690
annotation not available
  
 0.848
RPL24
Ribosomal protein L24.
  
 0.848
RPL38
Ribosomal protein L38.
   
 0.842
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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