Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASC3 | EIF4A3 | ENSVKKP00000020175 | ENSVKKP00000021453 | CASC3 exon junction complex subunit. | Eukaryotic translation initiation factor 4A3. | 0.999 |
CASC3 | ENSVKKP00000015354 | ENSVKKP00000020175 | ENSVKKP00000015354 | CASC3 exon junction complex subunit. | annotation not available | 0.970 |
CASC3 | ENSVKKP00000020612 | ENSVKKP00000020175 | ENSVKKP00000020612 | CASC3 exon junction complex subunit. | annotation not available | 0.940 |
CASC3 | ENSVKKP00000020613 | ENSVKKP00000020175 | ENSVKKP00000020613 | CASC3 exon junction complex subunit. | annotation not available | 0.940 |
CASC3 | RBM8A | ENSVKKP00000020175 | ENSVKKP00000006827 | CASC3 exon junction complex subunit. | RNA binding motif protein 8A. | 0.998 |
CASC3 | RNPS1 | ENSVKKP00000020175 | ENSVKKP00000012105 | CASC3 exon junction complex subunit. | RNA binding protein with serine rich domain 1. | 0.844 |
CASC3 | SMG5 | ENSVKKP00000020175 | ENSVKKP00000011543 | CASC3 exon junction complex subunit. | SMG5 nonsense mediated mRNA decay factor. | 0.775 |
CASC3 | SMG6 | ENSVKKP00000020175 | ENSVKKP00000002508 | CASC3 exon junction complex subunit. | SMG6 nonsense mediated mRNA decay factor. | 0.911 |
CASC3 | UPF3A | ENSVKKP00000020175 | ENSVKKP00000012562 | CASC3 exon junction complex subunit. | UPF3A regulator of nonsense mediated mRNA decay. | 0.969 |
CASC3 | UPF3B | ENSVKKP00000020175 | ENSVKKP00000017400 | CASC3 exon junction complex subunit. | UPF3B regulator of nonsense mediated mRNA decay. | 0.969 |
EIF4A3 | CASC3 | ENSVKKP00000021453 | ENSVKKP00000020175 | Eukaryotic translation initiation factor 4A3. | CASC3 exon junction complex subunit. | 0.999 |
EIF4A3 | ENSVKKP00000015354 | ENSVKKP00000021453 | ENSVKKP00000015354 | Eukaryotic translation initiation factor 4A3. | annotation not available | 0.959 |
EIF4A3 | ENSVKKP00000020612 | ENSVKKP00000021453 | ENSVKKP00000020612 | Eukaryotic translation initiation factor 4A3. | annotation not available | 0.909 |
EIF4A3 | ENSVKKP00000020613 | ENSVKKP00000021453 | ENSVKKP00000020613 | Eukaryotic translation initiation factor 4A3. | annotation not available | 0.909 |
EIF4A3 | RBM8A | ENSVKKP00000021453 | ENSVKKP00000006827 | Eukaryotic translation initiation factor 4A3. | RNA binding motif protein 8A. | 0.999 |
EIF4A3 | RNPS1 | ENSVKKP00000021453 | ENSVKKP00000012105 | Eukaryotic translation initiation factor 4A3. | RNA binding protein with serine rich domain 1. | 0.995 |
EIF4A3 | SMG5 | ENSVKKP00000021453 | ENSVKKP00000011543 | Eukaryotic translation initiation factor 4A3. | SMG5 nonsense mediated mRNA decay factor. | 0.844 |
EIF4A3 | SMG6 | ENSVKKP00000021453 | ENSVKKP00000002508 | Eukaryotic translation initiation factor 4A3. | SMG6 nonsense mediated mRNA decay factor. | 0.935 |
EIF4A3 | UPF3A | ENSVKKP00000021453 | ENSVKKP00000012562 | Eukaryotic translation initiation factor 4A3. | UPF3A regulator of nonsense mediated mRNA decay. | 0.978 |
EIF4A3 | UPF3B | ENSVKKP00000021453 | ENSVKKP00000017400 | Eukaryotic translation initiation factor 4A3. | UPF3B regulator of nonsense mediated mRNA decay. | 0.981 |
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