STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1619 aa)    
Predicted Functional Partners:
LIN28A
Lin-28 homolog A.
   
 0.757
BICC1
BicC family RNA binding protein 1.
   
 0.695
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.693
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.685
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.670
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.667
LIN28B
Lin-28 homolog B.
   
 0.657
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
 
 0.657
MOV10
Mov10 RISC complex RNA helicase.
    
 
 0.631
CLP1
Cleavage and polyadenylation factor I subunit 1.
     
 0.587
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.