STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP58NOP58 ribonucleoprotein. (536 aa)    
Predicted Functional Partners:
PDCD11
Programmed cell death 11.
   
 0.999
NOP56
NOP56 ribonucleoprotein.
  
0.999
ENSVKKP00000001546
annotation not available
   
 0.999
UTP6
UTP6 small subunit processome component.
   
 0.999
WDR3
WD repeat domain 3.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
WDR75
WD repeat domain 75.
   
 0.999
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.999
UTP18
UTP18 small subunit processome component.
   
 0.999
DDX18
DEAD-box helicase 18.
  
 0.999
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.