STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC11CSEC11 homolog C, signal peptidase complex subunit. (177 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
   
 0.973
SPCS1
Signal peptidase complex subunit 1.
   
 0.966
ENSVKKP00000025456
annotation not available
   
 0.897
ENSVKKP00000025458
annotation not available
   
 0.897
KPTN
Kaptin, actin binding protein.
    
 0.830
ENSVKKP00000013898
annotation not available
    
 0.783
GRPR
Gastrin releasing peptide receptor.
     
 0.773
WDR24
WD repeat domain 24.
    
 0.770
WDR59
WD repeat domain 59.
    
 0.768
NMBR
Neuromedin B receptor.
     
 0.766
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.