STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP89Centrosomal protein 89. (759 aa)    
Predicted Functional Partners:
SCLT1
Sodium channel and clathrin linker 1.
     
 0.936
CEP83
Centrosomal protein 83.
     
 0.936
FBF1
Fas binding factor 1.
     
 0.927
ODF2
Outer dense fiber of sperm tails 2.
     
 0.872
ENSVKKP00000010558
annotation not available
     
 0.854
ODF2L
Outer dense fiber of sperm tails 2 like.
     
 0.804
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
     
 0.782
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
     
 0.782
ATRIP
ATR interacting protein.
   
    0.719
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
   
    0.718
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
Server load: low (20%) [HD]