STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX6SRY-box transcription factor 6. (311 aa)    
Predicted Functional Partners:
ENSVKKP00000017291
annotation not available
 
      0.898
CTNNB1
Catenin beta 1.
   
 0.734
BPTF
Bromodomain PHD finger transcription factor.
    
  0.720
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.648
JUP
Junction plakoglobin.
   
 0.636
SOX10
SRY-box transcription factor 10.
    
0.565
SOX9
SRY-box transcription factor 9.
    
0.565
SOX4
SRY-box transcription factor 4.
    
0.542
ENSVKKP00000017169
annotation not available
    
0.542
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
  0.537
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.