STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP40Rho GTPase activating protein 40. (670 aa)    
Predicted Functional Partners:
TNS1
Tensin 1.
    
 
 0.649
TNS3
Tensin 3.
    
 
 0.649
TNS2
Tensin 2.
    
 
 0.649
CDC42
Cell division cycle 42.
   
 0.547
ENSVKKP00000012796
annotation not available
   
 0.531
RHOB
Ras homolog family member B.
   
 0.531
ENSVKKP00000018151
annotation not available
   
 0.531
RHOA
Ras homolog family member A.
   
 0.531
RND1
Rho family GTPase 1.
   
 0.518
RHOBTB3
Rho related BTB domain containing 3.
   
 0.518
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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