STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HID1HID1 domain containing. (796 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
   
 
 0.789
USP40
Ubiquitin specific peptidase 40.
    
 
 0.777
USP7
Ubiquitin specific peptidase 7.
    
 
 0.777
NUP155
Nucleoporin 155.
    
 
 0.765
NUP54
Nucleoporin 54.
    
 
 0.732
NUP214
Nucleoporin 214.
    
 
 0.725
ALDH8A1
Aldehyde dehydrogenase 8 family member A1.
   
 0.683
ENSVKKP00000025635
annotation not available
    
 
 0.682
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
    
 0.679
ENSVKKP00000012542
annotation not available
    
 0.679
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.