STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVKKP00000022005annotation not available (261 aa)    
Predicted Functional Partners:
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.923
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.923
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.880
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.876
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.875
SRP54
Signal recognition particle 54.
  
 0.863
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.861
ENSVKKP00000021773
annotation not available
  
   0.859
MRPL12
Mitochondrial ribosomal protein L12.
   
 
 0.854
MRPS9
Mitochondrial ribosomal protein S9.
  
   0.853
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.