STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX24Sorting nexin 24. (170 aa)    
Predicted Functional Partners:
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 
 0.663
CSNK1A1
Casein kinase 1 alpha 1.
    
   0.648
SNX2
Sorting nexin 2.
 
 
  
 0.600
KYNU
Kynureninase.
      
 0.589
SNX11
Sorting nexin 11.
     
 0.572
YKT6
YKT6 v-SNARE homolog.
     
 0.482
STX8
Syntaxin 8.
    
 0.447
ENSVKKP00000006331
annotation not available
    
 0.447
STX6
Syntaxin 6.
    
 0.447
RINT1
RAD50 interactor 1.
   
 
  0.436
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.