STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB15Ankyrin repeat and SOCS box containing 15. (593 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.720
NFKBIB
NFKB inhibitor beta.
  
 
  0.719
ENSVKKP00000002585
annotation not available
    
 0.677
ENSVKKP00000005338
annotation not available
    
 0.620
IFT81
Intraflagellar transport 81.
    
 0.617
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.613
CUL5
Cullin 5.
    
 0.610
SLC13A1
Solute carrier family 13 member 1.
   
 
 0.610
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.607
IFT88
Intraflagellar transport 88.
   
 0.605
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.