HDAC10 protein (Varanus komodoensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDAC10

Histone deacetylase 10. (463 aa)

Predicted Functional Partners:

ARID4A

0.966

ARID4B

0.966

MACROH2A2

0.826

MACROH2A1

0.826

SIN3A

0.814

ENSVKKP00000027649

0.814

RBBP4

0.809

ENSVKKP00000023459

0.808

WDR73

0.808

ENSVKKP00000000433

0.800

Your Current Organism:

Varanus komodoensis

NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSVKKP00000001481	ENSVKKP00000026574	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.740
ARID4A	ENSVKKP00000000433	ENSVKKP00000001481	ENSVKKP00000000433	AT-rich interaction domain 4A.	annotation not available	0.504
ARID4A	ENSVKKP00000023459	ENSVKKP00000001481	ENSVKKP00000023459	AT-rich interaction domain 4A.	annotation not available	0.504
ARID4A	ENSVKKP00000027649	ENSVKKP00000001481	ENSVKKP00000027649	AT-rich interaction domain 4A.	annotation not available	0.999
ARID4A	HDAC10	ENSVKKP00000001481	ENSVKKP00000024552	AT-rich interaction domain 4A.	Histone deacetylase 10.	0.966
ARID4A	MACROH2A1	ENSVKKP00000001481	ENSVKKP00000021474	AT-rich interaction domain 4A.	macroH2A.1 histone.	0.736
ARID4A	MACROH2A2	ENSVKKP00000001481	ENSVKKP00000003679	AT-rich interaction domain 4A.	macroH2A.2 histone.	0.736
ARID4A	RBBP4	ENSVKKP00000001481	ENSVKKP00000013737	AT-rich interaction domain 4A.	RB binding protein 4, chromatin remodeling factor.	0.998
ARID4A	SIN3A	ENSVKKP00000001481	ENSVKKP00000025584	AT-rich interaction domain 4A.	SIN3 transcription regulator family member A.	0.999
ARID4A	WDR73	ENSVKKP00000001481	ENSVKKP00000024117	AT-rich interaction domain 4A.	WD repeat domain 73.	0.998
ARID4B	ARID4A	ENSVKKP00000026574	ENSVKKP00000001481	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.740
ARID4B	ENSVKKP00000000433	ENSVKKP00000026574	ENSVKKP00000000433	AT-rich interaction domain 4B.	annotation not available	0.504
ARID4B	ENSVKKP00000023459	ENSVKKP00000026574	ENSVKKP00000023459	AT-rich interaction domain 4B.	annotation not available	0.504
ARID4B	ENSVKKP00000027649	ENSVKKP00000026574	ENSVKKP00000027649	AT-rich interaction domain 4B.	annotation not available	0.999
ARID4B	HDAC10	ENSVKKP00000026574	ENSVKKP00000024552	AT-rich interaction domain 4B.	Histone deacetylase 10.	0.966
ARID4B	MACROH2A1	ENSVKKP00000026574	ENSVKKP00000021474	AT-rich interaction domain 4B.	macroH2A.1 histone.	0.736
ARID4B	MACROH2A2	ENSVKKP00000026574	ENSVKKP00000003679	AT-rich interaction domain 4B.	macroH2A.2 histone.	0.736
ARID4B	RBBP4	ENSVKKP00000026574	ENSVKKP00000013737	AT-rich interaction domain 4B.	RB binding protein 4, chromatin remodeling factor.	0.998
ARID4B	SIN3A	ENSVKKP00000026574	ENSVKKP00000025584	AT-rich interaction domain 4B.	SIN3 transcription regulator family member A.	0.999
ARID4B	WDR73	ENSVKKP00000026574	ENSVKKP00000024117	AT-rich interaction domain 4B.	WD repeat domain 73.	0.998