STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (383 aa)    
Predicted Functional Partners:
ENSVKKP00000015563
annotation not available
    
  0.697
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.617
ENSVKKP00000019271
annotation not available
    
  0.617
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.577
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
    
 
 0.486
UBE2T
Ubiquitin conjugating enzyme E2 T.
    
 0.431
ENSVKKP00000021831
annotation not available
    
 0.429
USP37
Ubiquitin specific peptidase 37.
    
  0.410
USP2
Ubiquitin specific peptidase 2.
    
  0.410
USP21
Ubiquitin specific peptidase 21.
    
  0.410
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.