STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (745 aa)    
Predicted Functional Partners:
ENSVKKP00000015563
annotation not available
    
  0.852
ENSVKKP00000004773
annotation not available
   
  0.692
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
   
  0.692
UBE2D3
Ubiquitin conjugating enzyme E2 D3.
   
  0.692
ENSVKKP00000018567
annotation not available
   
  0.692
ENSVKKP00000020274
annotation not available
    
  0.556
ZFAND4
Zinc finger AN1-type containing 4.
    
  0.541
ENSVKKP00000017247
annotation not available
    
 0.539
ENSVKKP00000017256
annotation not available
    
 0.539
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
    
 0.498
Your Current Organism:
Varanus komodoensis
NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.