NCBP3 protein (Varanus komodoensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

NCBP3

Nuclear cap binding subunit 3. (533 aa)

Predicted Functional Partners:

NCBP1

0.977

ENSVKKP00000015415

0.883

ENSVKKP00000015447

0.883

EIF4E2

0.855

AGO2

0.847

ENSVKKP00000026804

0.843

EIF4E

0.770

EIF4E1B

0.770

THOC2

0.727

ALYREF

0.702

Your Current Organism:

Varanus komodoensis

NCBI taxonomy Id: 61221
Other names: Komodo dragon, Komodowaran, V. komodoensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO2	EIF4E	ENSVKKP00000021669	ENSVKKP00000016381	Argonaute RISC catalytic component 2.	Eukaryotic translation initiation factor 4E.	0.867
AGO2	EIF4E1B	ENSVKKP00000021669	ENSVKKP00000022578	Argonaute RISC catalytic component 2.	Eukaryotic translation initiation factor 4E family member 1B.	0.867
AGO2	ENSVKKP00000015415	ENSVKKP00000021669	ENSVKKP00000015415	Argonaute RISC catalytic component 2.	annotation not available	0.819
AGO2	ENSVKKP00000015447	ENSVKKP00000021669	ENSVKKP00000015447	Argonaute RISC catalytic component 2.	annotation not available	0.819
AGO2	ENSVKKP00000026804	ENSVKKP00000021669	ENSVKKP00000026804	Argonaute RISC catalytic component 2.	annotation not available	0.857
AGO2	NCBP1	ENSVKKP00000021669	ENSVKKP00000004383	Argonaute RISC catalytic component 2.	Nuclear cap binding protein subunit 1.	0.893
AGO2	NCBP3	ENSVKKP00000021669	ENSVKKP00000025991	Argonaute RISC catalytic component 2.	Nuclear cap binding subunit 3.	0.847
ALYREF	EIF4E	ENSVKKP00000006485	ENSVKKP00000016381	Aly/REF export factor.	Eukaryotic translation initiation factor 4E.	0.702
ALYREF	EIF4E1B	ENSVKKP00000006485	ENSVKKP00000022578	Aly/REF export factor.	Eukaryotic translation initiation factor 4E family member 1B.	0.702
ALYREF	ENSVKKP00000015415	ENSVKKP00000006485	ENSVKKP00000015415	Aly/REF export factor.	annotation not available	0.952
ALYREF	ENSVKKP00000015447	ENSVKKP00000006485	ENSVKKP00000015447	Aly/REF export factor.	annotation not available	0.952
ALYREF	NCBP1	ENSVKKP00000006485	ENSVKKP00000004383	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.986
ALYREF	NCBP3	ENSVKKP00000006485	ENSVKKP00000025991	Aly/REF export factor.	Nuclear cap binding subunit 3.	0.702
ALYREF	THOC2	ENSVKKP00000006485	ENSVKKP00000017473	Aly/REF export factor.	THO complex 2.	0.997
EIF4E	AGO2	ENSVKKP00000016381	ENSVKKP00000021669	Eukaryotic translation initiation factor 4E.	Argonaute RISC catalytic component 2.	0.867
EIF4E	ALYREF	ENSVKKP00000016381	ENSVKKP00000006485	Eukaryotic translation initiation factor 4E.	Aly/REF export factor.	0.702
EIF4E	EIF4E1B	ENSVKKP00000016381	ENSVKKP00000022578	Eukaryotic translation initiation factor 4E.	Eukaryotic translation initiation factor 4E family member 1B.	0.902
EIF4E	EIF4E2	ENSVKKP00000016381	ENSVKKP00000001797	Eukaryotic translation initiation factor 4E.	Eukaryotic translation initiation factor 4E family member 2.	0.910
EIF4E	ENSVKKP00000015415	ENSVKKP00000016381	ENSVKKP00000015415	Eukaryotic translation initiation factor 4E.	annotation not available	0.836
EIF4E	ENSVKKP00000015447	ENSVKKP00000016381	ENSVKKP00000015447	Eukaryotic translation initiation factor 4E.	annotation not available	0.836