STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITM2BIntegral membrane protein 2B. (266 aa)    
Predicted Functional Partners:
PIANP
PILR alpha associated neural protein.
      
 0.770
GNB1L
G protein subunit beta 1 like.
      
 0.766
JAGN1
Jagunal homolog 1.
      
 0.746
AJAP1
Adherens junctions associated protein 1.
      
 0.577
TTC8
Tetratricopeptide repeat domain 8.
   
 
 0.528
SYT11
Synaptotagmin 11.
    
 
 0.522
DMTF1
Cyclin D binding myb like transcription factor 1.
      
 0.520
VWA5A
Von Willebrand factor A domain containing 5A.
      
 0.519
C15orf48
Chromosome B3 C15orf48 homolog.
      
 0.510
SYNPR
Synaptoporin.
    
 
 0.480
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.