STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF12Kruppel like factor 12. (402 aa)    
Predicted Functional Partners:
TTC13
Tetratricopeptide repeat domain 13.
   
 0.756
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.743
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.526
PURB
Purine rich element binding protein B.
      
 0.519
DMRT2
Doublesex and mab-3 related transcription factor 2.
    
 0.515
CCPG1
Cell cycle progression 1.
    
 0.493
PAK5
P21 (RAC1) activated kinase 5.
    
 0.479
ZBTB7A
Zinc finger and BTB domain containing 7A.
   
  
0.475
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.474
PCBP3
poly(rC) binding protein 3.
    
 
 0.473
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.